Protocols/Recipes

AbC-Arrays:

10x PBS Recipe for 1 liter

  • Dissolve in 800 ml distilled water:
    • 80 g NaCl {Reanal, No.:2464-1-22-38, Nátrium-klorid, Ph. Eur.5; MW:58.44}
    • 2 g KCl {Reanal, No.:18050-1-01-38, Kálium-klorid, a.r.; MW: 74.56}
    • 14.24 g Na2HPO4*2H2O {Reanal, No.:08973-1-01-38, di-Nátrium-hidrogén-foszfát 2-hidrát, a.r.; MW:177,99}
    • 2 g KH2PO4 {Reanal, No.:17890-01-38, Kálium-dihidrogén-foszfát, a.r.; MW:136.09}
  • Adjust volume to 1 liter with H2O
  • Filtrate through an 0.22um filter and divide in 500ml aliquotes
  • Store at room temperature

1x PBS Recipe for 1 liter[137mM NaCl, 2.7mM KCl, 8mM Na2HPO4, 1.46mM KH2PO4]

  • Dissolve in 800 ml distilled water:
    • 8 g NaCl {Reanal, No.:2464-1-22-38, Nátrium-klorid, Ph. Eur.5; MW:58.44}
    • 0.2 g KCl {Reanal, No.:18050-1-01-38, Kálium-klorid, a.r.; MW: 74.56}
    • 1.424 g Na2HPO4*2H2O {Reanal, No.:08973-1-01-38, di-Nátrium-hidrogén-foszfát 2-hidrát, a.r.; MW:177,99}
    • 0.2 g KH2PO4 {Reanal, No.:17890-01-38, Kálium-dihidrogén-foszfát, a.r.; MW:136.09}
  • Adjust volume to 1 liter with H2O
  • Filtrate trough an 0.22um filter or sterilize by autoclave
  • Store at room temperature

PBS-Tween for 1 liter [0.05% Tween 20, PBS]

  • Mix on magnetic stirrer:
    • 0.5ml Tween 20 {Sigma No.:P-1379, Polyoxylethylene-sorbitan monolaurate (Tween 20)}
    • 1 liter PBS

PBS-Tween BSA for 300ml [0.05% Tween 20, 5%BSA, 0.05% azide, PBS]

  • Mix on magnetic stirrer:
    • 300ml PBS-Tween
    • 15g BSA {Sigma, No.:A3059-100G, Albumin, bovine serum, Fraction V}
    • 1.5ml Sodium azide (from 10% NaN3 stock solution)
  • Filtrate through an 0.45um filter
  • Aliquot 50ml/falcon
  • Store at 4°C

Ca2+ Mg2+ stock solution for 5ml [0.25M Ca2+, 0.07M Mg2+]

  • Dissolve in 5 ml Milli Q water:
    • 0.1838g CaCl2*2H2O {Reanal 11024 MSZ 24161-65 Kalcium-klorid, szárított MW: 147.02 CaCl2*2H2O}
    • 0.0712g MgCl2*6H2O {Reanal No.: 20281-1-01-38 Magnézium-klorid 6-hidrát MW: 203.30 MgCl2*6H2O}

Ca-Mg-VBS (veronal buffered saline) for 25ml (for serum dilution)[2.5mM Ca2+, 0.7mM Mg2+, 0.05% Tween 20, 5%BSA, VBS]

  • Mix on magnetic stirrer:
    • 5ml 5x VBS
    • 250ul Ca2+ Mg2+ stock solution [0.25M Ca2+, 0.07M Mg2+]
    • 1.25g BSA {Sigma, No.:A3059-100G, Albumin, bovine serum, Fraction V}
    • 12.5ul Tween 20 {Sigma No.:P-1379, Polyoxylethylene-sorbitan monolaurate (Tween 20)}
  • Adjust volume to 25ml with Milli Q water
  • Filtrate though an 0.45um filter
  • Aliquot 1ml/eppendorf
  • Store at -20C

Mg-EGTA-VBS solution for 10ml (dilute serum 5x with it)[2.5mM Mg2+, 6.2mM EGTA, 5%BSA, 0.05% Tween 20, VBS]

  • Mix on magnetic stirrer:
    • 2ml 5x VBS
    • 310ul 0.2M EGTA
    • 25ul 1M MgCl2 stock solution
    • 0.5g BSA {Sigma, No.:A3059-100G, Albumin, bovine serum, Fraction V}
    • 50ul 10% Tween 20 {Sigma No.:P-1379, Polyoxylethylene-sorbitan monolaurate (Tween 20)}
  • Adjust volume to 10ml with Milli Q water
  • Filtrate though an 0.45um filter
  • Aliquot 1ml/eppendorf
  • Store at -20C

EDTA-VBS solution for 10ml (dilute serum 5x with it)[25mM EDTA, 5%BSA, 0.05% Tween 20, VBS ]

  • Mix on magnetic stirrer:
    • 2ml 5x VBS
    • 500ul 0.5M EDTA
    • 0.5g BSA {Sigma, No.:A3059-100G, Albumin, bovine serum, Fraction V}
    • 50ul 10% Tween 20 {Sigma No.:P-1379, Polyoxylethylene-sorbitan monolaurate (Tween 20)}
  • Adjust volume to 10ml with Milli Q water
  • Filtrate though an 0.45um filter
  • Aliquot 1ml/eppendorf
  • Store at -20C

0.2M EGTA stock solution for 10ml

  • Mix on magnetic stirrer:
    • 8ml Milli Q water
    • 0.7608g EGTA{ethylene glycol-bis(beta-aminoethyl ether)-N,N,N',N'-tetraacetic acid (EGTA) Sigma E-4378 LOT 111K5411 FW 380,4}
  • Adjust to pH8 with 10N NaOH otherwise it won't disolve (be careful EGTA is an acid)
  • Adjust volume to 10ml with Milli Q water
  • Store at 4C

1x Veronal buffer (VBS)[145mM NaCl, 1,8mM Na-diethyl-barbiturate (C8H11O3N2Na), 3mM 5,5’-diethyl barbiture acid (C8H12N2O3), pH7.3]

  • Dilute 5x Veronal buffer with Milli Q water

5x Veronal buffer for 500ml (5xVBS) [727mM NaCl, 9.12mM Na-diethyl-barbiturate (C8H11O3N2Na), 15.63mM 5,5’-diethyl barbiture acid (C8H12N2O3), pH7.3]

  • Make solution 'A':
    • 0.94g Na-diethyl-barbiturate (C8H11O3N2Na){5,5-Diathylbarbitursaure. Na-salz Serva 18797; MW:206.2}
    • 21.25 g NaCl {Reanal, No.:2464-1-22-38, Nátrium-klorid, Ph. Eur.5; MW:58.44}
    • ~300ml Milli Q water
  • Make solution 'B':
    • 1.44g 5,5’- diethyl barbiture acid {5,5-dietil-barbitursav Reanal 04049; MW:184.2}
    • ~100ml Milli Q water
    • Boil it otherwise it won’t dissolve, then cool it down
  • Mix solution ‘A’ and ‘B’ set pH to 7.3 with app. 50-70μl 10N NaOH
  • Fill up until 500ml with Milli Q water, then store it at +4C

ELISA:

Method

  • Coat ELISA plate with 50ul/well 0.2-10ug/ml protein (purity should be above 3%) in PBS or carbonate buffer for 2h on R/T or O/N in the fridge
  • Wash 3x with PBS-Tween (alternative: following washing incubate in ELISA-blocking buffer for 30min R/T and wash 3x with PBS-Tween)
  • Incubate in PBS-Tween diluted antibody/protein solution for 1h at 37C (ideally after 5h reach the equibrium)
  • Wash 3x with PBS-Tween
  • Develope with TMB
    • Add 100ul TMB developing solution to wells
      • For 1 ELISA plate mix:
        • 11ml TMB buffer
        • 110ul TMB solution
        • 22ul H2O2 {Hydrogen peroxide 30% solution Sigma H-1009}
    • Add 100ul 2M H2SO4 to stop the reaction
    • Detect absorbance at 450nm

Carbonate buffer pH 9.5 for 1 liter (for ELISA coat)

  • Disolve in 1 liter Milli Q water:
    • 1.6g Na2CO3
    • 2.9g NaHCO3
  • Adjust to pH 9.5
  • Store at R/T

ELISA blocking-buffer for 10ml [0.05% Tween 20, 5%BSA, 0.05% azide, PBS]

  • Mix on magnetic stirrer:
    • 10ml PBS-Tween
    • 100mg BSA {Sigma, No.:A3059-100G, Albumin, bovine serum, Fraction V}
    • 50ul Sodium azide (from 10% NaN3 stock solution)
  • Store at +4C

TMB solution for 1ml [10mg/ml TNB in DMSO]

  • Disolve in 1ml DMSO {Dimethyl sulfoxide, minimum 99.5% GC Sigma D5879-100ml }
    • 10mg TNP {3,3',5,5'-tetramethyl-benzidine Sigma T-2885 FW240.3}
  • Store at +4C

TMB-buffer for 1 liter[0.1M Na-acetate, pH 5.5]

  • Disolve in 950ml Milli Q water
    • 13.6g Na-acetate {Nátrium acetát, kristályvizes CH3COONa*3H2O M:136.08 Reanal 14021}
  • Adjust pH to 5.5 with app. 700ul cc. Acetic acid {Ecetsav 96% Reanal 0914-1-08-65 M:60.05}
  • Adjust volume to 1 liter with Milli Q water

4M H2SO4 for 1 liter

  • Carefully pour 392ml H2SO4 {Sulphuric acid 96% H2SO4 Carlo Erba reagents Code no. 410301 (Reanal 17769) FW 98.078} into 608ml Milli Q water (always pour acide into water)

2M H2SO4 for 100ml

  • mix 50ml Milli Q water + 50ml 4M H2SO4 solution

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ACK, GKN, RPMI